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Best Free Alternatives to EndNote 2025.2

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Category: Citations / Reference ManagementVerified for 2025

Top Recommended Replacements

Zotero 7

FREE

Top Modern Alternative

Why we like it

The landmark 2025 'v7' update brought a complete UI overhaul with native Dark Mode; supports EPUBs and webpage snapshots; native Apple Silicon and Windows on ARM support; 100% free with optional low-cost cloud storage ($20/yr for 2GB).

Keep in mind

The free storage (300MB) fills up quickly with large PDF libraries; lacks the native AI manuscript-to-journal matching found in EndNote 2025.

Mendeley Reference Manager

FREE

Best for AI-Powered Search

Why we like it

Owned by Elsevier; late 2025 updates include 'Advanced Search' with AI context-awareness and real-time sync for Mendeley Cite; includes 2GB of free storage; excellent social networking features for researchers.

Keep in mind

The move away from the classic 'Mendeley Desktop' has frustrated long-time users; proprietary format makes migrating libraries more complex than Zotero.

Paperguide

FREE

Best AI-Native Alternative

Why we like it

A 2025 standout; built-in 'Chat with Paper' feature that extracts insights across your entire library; excellent for technical developers needing to summarize code-heavy papers; modern, clutter-free web interface.

Keep in mind

Newer platform with fewer specialized citation styles (e.g., niche medical journals) compared to EndNote's 7,000+ styles.

Paperpile

Best for Google Workspace

Why we like it

The favorite for Google Docs users; cloud-based with exceptional mobile apps for iOS and Android; seamless PDF management directly in Google Drive; very affordable unlimited storage.

Keep in mind

Subscription-only; lacks an offline-first desktop application for deep local work.

JabRef 6.0

FREE

Best for LaTeX / Developers

Why we like it

Native BibTeX/BibLaTeX support; 100% free; the late 2025 update improved the web-search integration for computer science journals; lightweight and data-sovereign.

Keep in mind

Purely technical UI; not suitable for Word/General users compared to Zotero or EndNote.

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